CDS

Accession Number TCMCG016C25521
gbkey CDS
Protein Id OMO55794.1
Location complement(join(60429..60639,60741..60854,60945..61048,61135..61242,61364..61444,61539..61607,61830..61919,62242..62331,62580..62669,62866..62931,63019..63258,63546..63662,63775..63909,64119..64241,64372..64461,64581..64637,64842..64929,65325..65510,65887..66010,66140..66236,66414..66506))
Organism Corchorus capsularis
locus_tag CCACVL1_27007

Protein

Length 790aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014568.1
Definition Vacuolar protein sorting-associated protein 35 [Corchorus capsularis]
Locus_tag CCACVL1_27007

EGGNOG-MAPPER Annotation

COG_category U
Description Plays a role in vesicular protein sorting
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K18468        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005771        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0030904        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042147        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATCGCTGACGGAGTCGAAGACGAAGAGAAATGGCTTGCCGCGGGCATCGCCGGCCTTCAACAGAACGCTTTCTACATGCATCGCGCTTTGGATTCAAACAATCTCAGAGATGCTTTGAAGTATTCTGCTCAGATGTTATCAGAGCTTCGAACCTCGAGGCTTTCTCCACACAAATACTACGAACTATATATGCGAGCATTTGATGAATTAAGGAAGCTGGAGATGTTTTTTAAGGAAGAGACAAGGCGTGGTTGCTCTATTATCGATCTGTATGAGCTCGTCCAGCATGCTGGCAATATATTGCCTAGATTATATCTCCTCTGTACCGTAGGCTGTGTATATATCAAAACCAAGGAAGCTCCTGCTAAGGATGTTCTTAAAGATCTTGTTGAAATGTGCCGTGGCATACAGCATCCTGTACGTGGGCTCTTTCTAAGGAGCTACCTGGCTCAAGTTAGTAGGGATAAATTGCCGGATATAGGTTCTGAGTATGAAGGGGATGCAGACTCGGTCGTGGATGCTGTGGAATTTGTGCTTCAAAACTTCACAGAGATGAACAAGTTGTGGGTGCGGATGCAACATCAGGGACCTGCCCGAGAAAAGGAGAAACGGGAGAAAGAGAGGAGCGAGCTACGCGATCTTGTTGGGAAGAATCTTCATGTACTCGGTCAGATAGAGGGTGTTGACCTTGATATGTACAAAGATACCGTTCTTCCCAGAGTCCTTGAACAGGTTGTTAATTGTAAAGATGAGCTAGCTCAATACTATCTAATGGATTGCATAATTCAAGTCTTTCCTGATGAATACCACTTGCAAACTCTTGATGTCTTGTTGGGTGCTTTCCCACAACTTCAGCCAACTGTTGACATTAAAACAGTTCTATCTCGATTAATGGAAAGGCTATCAAATTATGCTGCTTCAAGTGCAGATGTTTTGCCTGAGTTCTTGCAAGTAGAAGCTTTTTCGAAGTTGAATAATGCTATAGGAAAGGTGATCGAAGCACAGCCTGATATGCCTACCCTCGGGGTGATAACTTTATATTCGTCTCTTCTTACTTTTACCCTCCATGTCCACCCAGAGCGACTTGATTATGCGGATCAAGTGTTGGGAGCATGTGTGAAAAAACTCTCTGGCAAAGGAAAGCTTCAAGACAACAAAGCGACAAAACAGATTGTTGCTCTTTTAAGTGCTCCACTTGAGAAATATAATGATATTGTTACAGCATTGAAGCTTTCAAATTATCCTCGTATGATGGAATACCTTGACAGTGAAACTAATAAAGTCATGGCAACTGTGATAATTCAAAGCATTATGAAGAATAAAACGCGTATCTCTACTGCTGACAGGGTCGAGGCGCTGTTTGAACTGATAAAAGGCCTTATTAAGGATCTGGATGGGAGTCCTGATGATGAGGTTGATGAAGATGATTTTAAGGAGGAGCAGAATTCTGTTGCACGCCTTATCCAGATGTTGTATAATGATGATCCAGAAGAGATGTTTAAGATAATATGCACAGTGAGGAAGCATATCTTGGCTGGAGGACCAAAACGTCTGCCCTTCACTGTCCCTCCCCTTGTTTATTCTTCACTTAAGTTGGTTCGGCAACTACAAGGCCAAGAAGAAAACCCATTTGGAGAGGAGGAGTCAACGACACCAAAGAAAATATTCCAGCTATTGAATCAGACTGTTGAAACCCTCTCAAATGTTCCAGCCCCTGAGTTGGCACTACAGCTGTATTTGCAGTGTGCTGAGGCTGCAAATGACTGCGATTTAGAACCTGTAGCATATGAATTCTTCACACAAGCTTACATTTTATATGAAGAAGAAATTTCAGACTCTAGGGCACAGGTGACTGCAATACATTTGATAATTGGAACTCTGCAAAGGATGCATGTCTTTGGTGTTGAAAATAGGGATACTTTAACACACAAGGCTACCGGGTATTCTGCAAAACTCTTGAAGAAGCCTGATCAGTGCAGAGCTGTTTATGCATGTTCACATCTCTTCTGGGTTGATGATCAGGACAATATAAAAGATGGAGAGAGGGTCTTGCTTTGTCTCAAGCGGGCATTGAGAATTGCAAATGCTGCTCAACAGATGTCCAATGCGGCACGAGGTAGCACTGGATCAGTCACTCTCTTTGTTGAGATACTGAACAAGTACCTTTATTTCTATGAGAAGGGGAACCCCCAGATCAACGTTGCTGCAATCCAGAGCCTGATTGAGTTGATTACAACTGAGATGCAAAGCGAGACTAGCACTCCAGATCCTGCAGCAGATGCTTTCTTTGCCAGTACACTCCGATATATAGAATTCCAGAAACAGAAAGGTGGGGCAGTGGGTGAAAAATACGAGCCTATCAAGGTGTGA
Protein:  
MIADGVEDEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSRLSPHKYYELYMRAFDELRKLEMFFKEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGCVYIKTKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLAQVSRDKLPDIGSEYEGDADSVVDAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLGQIEGVDLDMYKDTVLPRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLDVLLGAFPQLQPTVDIKTVLSRLMERLSNYAASSADVLPEFLQVEAFSKLNNAIGKVIEAQPDMPTLGVITLYSSLLTFTLHVHPERLDYADQVLGACVKKLSGKGKLQDNKATKQIVALLSAPLEKYNDIVTALKLSNYPRMMEYLDSETNKVMATVIIQSIMKNKTRISTADRVEALFELIKGLIKDLDGSPDDEVDEDDFKEEQNSVARLIQMLYNDDPEEMFKIICTVRKHILAGGPKRLPFTVPPLVYSSLKLVRQLQGQEENPFGEEESTTPKKIFQLLNQTVETLSNVPAPELALQLYLQCAEAANDCDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDNIKDGERVLLCLKRALRIANAAQQMSNAARGSTGSVTLFVEILNKYLYFYEKGNPQINVAAIQSLIELITTEMQSETSTPDPAADAFFASTLRYIEFQKQKGGAVGEKYEPIKV